database search using peaks studio 5.2 Search Results


peaks searches  (ATCC)
98
ATCC peaks searches
Peaks Searches, supplied by ATCC, used in various techniques. Bioz Stars score: 98/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaks searches/product/ATCC
Average 98 stars, based on 1 article reviews
peaks searches - by Bioz Stars, 2026-04
98/100 stars
  Buy from Supplier
mascot v2.4  (Matrix Science)
90
Matrix Science mascot v2.4
Mascot V2.4, supplied by Matrix Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mascot v2.4/product/Matrix Science
Average 90 stars, based on 1 article reviews
mascot v2.4 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
peaks 7 software  (Bioinformatics Solutions Inc)
90
Bioinformatics Solutions Inc peaks 7 software
Peaks 7 Software, supplied by Bioinformatics Solutions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaks 7 software/product/Bioinformatics Solutions Inc
Average 90 stars, based on 1 article reviews
peaks 7 software - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
proteome discoverer software  (Thermo Fisher)
86
Thermo Fisher proteome discoverer software
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Proteome Discoverer Software, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/proteome discoverer software/product/Thermo Fisher
Average 86 stars, based on 1 article reviews
proteome discoverer software - by Bioz Stars, 2026-04
86/100 stars
  Buy from Supplier
peaks database search  (Bioinformatics Solutions Inc)
90
Bioinformatics Solutions Inc peaks database search
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Peaks Database Search, supplied by Bioinformatics Solutions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaks database search/product/Bioinformatics Solutions Inc
Average 90 stars, based on 1 article reviews
peaks database search - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
peaks database search algorithm  (Bioinformatics Solutions Inc)
90
Bioinformatics Solutions Inc peaks database search algorithm
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Peaks Database Search Algorithm, supplied by Bioinformatics Solutions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaks database search algorithm/product/Bioinformatics Solutions Inc
Average 90 stars, based on 1 article reviews
peaks database search algorithm - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
mascot search engine  (Matrix Science)
90
Matrix Science mascot search engine
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Mascot Search Engine, supplied by Matrix Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mascot search engine/product/Matrix Science
Average 90 stars, based on 1 article reviews
mascot search engine - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
mascot distiller version 2.4.3.3  (Matrix Science)
90
Matrix Science mascot distiller version 2.4.3.3
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Mascot Distiller Version 2.4.3.3, supplied by Matrix Science, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mascot distiller version 2.4.3.3/product/Matrix Science
Average 90 stars, based on 1 article reviews
mascot distiller version 2.4.3.3 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
de novo-assisted database search software peaks db version 7.5  (Bioinformatics Solutions Inc)
90
Bioinformatics Solutions Inc de novo-assisted database search software peaks db version 7.5
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
De Novo Assisted Database Search Software Peaks Db Version 7.5, supplied by Bioinformatics Solutions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/de novo-assisted database search software peaks db version 7.5/product/Bioinformatics Solutions Inc
Average 90 stars, based on 1 article reviews
de novo-assisted database search software peaks db version 7.5 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
gps explorer software version 3.6  (Thermo Fisher)
90
Thermo Fisher gps explorer software version 3.6
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Gps Explorer Software Version 3.6, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/gps explorer software version 3.6/product/Thermo Fisher
Average 90 stars, based on 1 article reviews
gps explorer software version 3.6 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
peaks software (version 4.2  (Bioinformatics Solutions Inc)
90
Bioinformatics Solutions Inc peaks software (version 4.2
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Peaks Software (Version 4.2, supplied by Bioinformatics Solutions Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/peaks software (version 4.2/product/Bioinformatics Solutions Inc
Average 90 stars, based on 1 article reviews
peaks software (version 4.2 - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier
thermo proteome discoverer  (Thermo Fisher)
90
Thermo Fisher thermo proteome discoverer
Validation of the <t>proteome</t> data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image <t>J</t> <t>software</t> and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.
Thermo Proteome Discoverer, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/thermo proteome discoverer/product/Thermo Fisher
Average 90 stars, based on 1 article reviews
thermo proteome discoverer - by Bioz Stars, 2026-04
90/100 stars
  Buy from Supplier

Image Search Results


Validation of the proteome data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image J software and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.

Journal: Molecular & Cellular Proteomics : MCP

Article Title: Integrated Transcriptomic and Proteomic Analysis of the Global Response of Synechococcus to High Light Stress *

doi: 10.1074/mcp.M114.046003

Figure Lengend Snippet: Validation of the proteome data and transcriptome data. A, Comparison of log2 expression of 20 selected differentially regulated genes measured by RNA-Seq and qRT-PCR. Positive and negative log2 expression ratios represent up- and down-regulation after HL exposure, respectively. Each data point is calculated from averages of biological triplicates. B, Results derived from RNA-Seq analysis (white bars; n = 2) were compared with those from qRT-PCR (gray bars; n = 3). C, Western blot analysis of protein expression levels of five representative proteins quantified by proteomics after HL exposure. Fold changes of protein levels were determined using Image J software and normalized by protein concentration. D, The mRNA expression level of the validated proteins as detected by qRT-PCR.

Article Snippet: Database Search Raw data files were processed to generate peak list files using Proteome Discoverer software (Thermo Fisher Scientific, v. 1.3.0.339).

Techniques: Expressing, RNA Sequencing Assay, Quantitative RT-PCR, Derivative Assay, Western Blot, Software, Protein Concentration